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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|160874727, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFKLNLITL ALLANTGFAI AADGYGLANA NTEKVKMSAW SCKGCVVETG TSGTVGVGVG  60
   61 YNSEEDIRSA NAFGTSNEVA GKLDADVTFR GEKGYRASVE AYQLGMDGGR LEMNAGKQGQ 120
  121 YNVNVNYRQI ATYNSNSALT PYSGVGSDNL TLPDNWVTAG SSSQMPLLMD SLNSLELSLK 180
  181 RERTGLGFDY QGESLWSTHV SYMREEKTGL KKASGGFFNQ SMMLAEPVDY TTDSIEAGIK 240
  241 LKGDNWFTAL NYNGSIFKNE YNQLNFDSAF NPTFGAQTSG SIALDPDNQS HTVSLMGQYN 300
  301 DSTNVLSARL LTGQMSQDQA LVTSGYGYQV PTEALDAKVD LIGLNLKVVS KVTNSLRLSG 360
  361 SYDYNDRDNN TQIEEWTQVS INNVNGKVAY NTPYDNTSQR FKVAADYRIT RGMKLDGGYD 420
  421 FRRDERNYQD RETTDENTVW ARFRVNSFET WDMWVKGSYG QRDGSEYQAS EWTSSETNSL 480
  481 LRKYNLANRD RTQVEARVTH SPIESLTIDF GARYALDDYT DTVIGLTESK DTSYDANISY 540
  541 MITDDLLANA FYNYQIIESE QAGSSNYSTP TWTGFIEDKV DVVGAGISYN NLLENKLRMG 600
  601 LDYTYSDSNS NTQVRQGITG DYGDYFAKVH NINLYAQYQA TEKMALRFDY KIENYKDNDA 660
  661 ANDIAVNGIW NVVGFGDNSH DYTAQMIMLS MSYKI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle