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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|113950960, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQQSVATRDQ SMSFTSLGLS APILKAVAEQ GYDTPSPIQA QAIPAVLQGK DVMAAAQTGT  60
   61 GKTAGFTLPM LELLSKGNRA QAGQVRALVL TPTRELAAQV AESVETYGKN LPLRSAVIFG 120
  121 GVPINPQIAK LRHGVDVLVA TPGRLMDLYN QKAVKFSQLE ILVLDEADRM LDMGFIRDIR 180
  181 KILAILPKQR QNLMFSATFS DEIRELAKGL VNNPVEISVT PRNAAATTVK QWVCPVDKSQ 240
  241 KSALLIQLIK QNDWQQVLVF SRTKHGANRL AKSLEDAGIK AAAIHGNKSQ TARTKALADF 300
  301 KNGQARVLVA TDIAARGLDI DQLPQVVNFD LPNVPEDYVH RIGRTGRAGA SGQAVSLVSN 360
  361 EEIKLLNDIE RLINRVLDRE MVEGFNHVLP ESRLGGGGKS SGKSVPSRRN TRSSNQPSSR 420
  421 DGAPRSAEHK DGQRSGDVAR GHKPNDKNPR HSGEASSAPR ADAKPRPPRS NDGRANSAGA 480
  481 SRPSESRSGS GENRGQAGEN PYANGPKKNT RRPNNGASRP RNSQD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle