YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|113950705, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFSSRAILR PNLLTQSNVK IHNSWFYQTC LNEQHLSALS LMSIGNTMKP ANNHGIKRIF  60
   61 RATGFSMKGL KAAWVHEAAF RQELMLAIVM LPVALWVDIS TIERLLLIFT LFIVLIVELL 120
  121 NSAIEAVVDR VGSEIHPLSG QAKDIASAAV FMSLALCGLT WLVVLAPLVF

Type	Start	End	Confidence
Cytoplasmic	1	77	0.90
Transmembrane Helix	78	99	0.74
Non-Cytoplasmic	100	104	0.65
Transmembrane Helix	105	128	0.83
Cytoplasmic	129	144	0.74
Transmembrane Helix	145	168	0.88
Non-Cytoplasmic	169	170	0.68