YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|160860582, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLDKLKKIWQ VLNRPSVHYS LGFLTLGGFV AGVIFWGGFN TALEATNKEA FCISCHEMEN  60
   61 NVYQELQTTI HFTNRSGVRA TCPDCHVPHN WTDKIARKMQ ASKEVWGKVF GTINTRDKFE 120
  121 SKRRELAEHE WARLKANDSL ECRNCHNFTY MDFTRQSPRA AQMHSTSLAS GEKTCIDCHK 180
  181 GIAHHLPDMA GVKGF

Type	Start	End	Confidence
Cytoplasmic	1	16	0.87
Transmembrane Helix	17	39	0.90
Non-Cytoplasmic	40	195	0.90