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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|149116311, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.73
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRFPFGLRT KVIGLSLFLL CLPWLGYQYV WEMEKYLRHG QERTLEGTTQ ALATALHERP  60
   61 KLFDGQASFL KQVEKSRDLY AYQLNGAILL DGKLNEWEEY QHRFIQYGEA HQIMRAEPNA 120
  121 PLTLSFTHMV GQYDGYLYAF FQVTDPTVVL RGKNALSVDR NDHLSIATLA PDNKFKRYIV 180
  181 ATTQPGWISA FELPANPKQT VPVKPEVRIQ GQWATTDVGY NVELRIPLDM VGSKLGFAIS 240
  241 DVNDSKNRDV AAVVGTSALD TVDNLGTVLV PSPEIENIIK GMSHYSSRIW VVDKHGRVLA 300
  301 KSGDIRANDS VWTRTLEDEK STTLWETFKR DYLHPLYYKI LTKPPKDFID SLQDSTELDG 360
  361 SHIQKALAGQ QSSTWRLTPD NKAVVLAAAS PIWIDNNVMG AVVAEETTHG IRTLRNRALE 420
  421 KLFNVILTIM SMGTLALFFF ASSISNRIRK LRDEAENAID SQGRVRNHLK PSKARDEIGD 480
  481 LSRSFSNIVG RLGQYTHYLE NMSSRLSHEL RTPVAVVRSS LEHLNLQTLD KDTQKYVDRA 540
  541 QEGVSRLSMI LNNMSEATRL EQSLTQADIT KFPLSQVVSG CMQGYQMTYP EQGFSVKVPE 600
  601 QPLMMQGVPE YIAQLMDKLI ANAIEFCDKG SAIEVTLTQV GKQATLLISN LGPELPVDMS 660
  661 EQIFDSMVSV RINQAQDKPH LGLGLYIARL VAEFHQGQIL ARNRSEHNGV DILVTLPLSP 720
  721 AS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle