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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|151365475, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESSPTPQQD LHTSQTRHAQ TLTRRSRLAL AVAASLLGTI GFTACSPTSN SATPSMSGNA  60
   61 ASNVQLVAPG APGKAPTWAF SGKTGIGTSY EPYTQGQYQD AKQNPISRVW FSLAQGILTE 120
  121 TMYGLIHNAQ LKELQFVITG NGFVDTEKDN TISSIEYLDT DANGRPQSLA YKIINKDIEG 180
  181 KYQIEKHIFT DPDRDTLMMR VTFTAFEDGI TPHLYVNPHI DNAGANDIGR IDTNTDNHTN 240
  241 THAGNQALVA YTAAKDSSVM TVKSELNFVQ ATTGFVGVSD GLADLADNGK LDTPYQTTST 300
  301 QDKSTVGNIA FTASYPTLIK AKPVTFNLVI GFGKDGAQSL ANADATLAAG YDAVLSAYKG 360
  361 DATHVGWHDY LSSLPAIANM ANNTTDSGKL LYTSAMVLKA QEDKTYAGAL IASLSNPWGD 420
  421 TVSAAVPSTG YKAVWPRDFY QCAMAFLAMG DTQTPKVAFE YLKKVQVTEM TPGFTGTPGW 480
  481 FLQKTHVDGQ IEWVGVQLDQ TAMPIMLGWK LWQAGVLTPD EISHWYQEML KGAADFLISG 540
  541 GEVNLDWNHT QIAPPKTQQE RWEEQAGYSP STTAAVIAGL VAASEIAKEA KDPDSSSRYL 600
  601 AAAKDLSNSL EKHLVTTQGL LKNSAGVSAP YYLRLSPNGE PNTSDRLAAN NGKQGLDQRQ 660
  661 ILDGGFLELV RYGVRGATDK LINQSLQLID NTELDSNLRL KYEFTAKDGS KIPGFRRYGN 720
  721 DGYGEDTVSG KNYAESGSNS ADQRGRVWPF FTGERGHFEL ALAQEKGELT GNNSQQTKQQ 780
  781 LINTYVQGME TFANAGMMLP EQAWDGVGDA TRYHYQLGQG TNSATPLAWT HAEYIKLVRS 840
  841 MTDGQVWDNY PIVPAALK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle