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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|113907848, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFIKTNPIQF TGRHLTKSHA RQSSSRQKRS QALLCPTLIA LAVTSLFSAN VFAKTVTVSS  60
   61 PNQQIQISLS DDTGRPEYKI DFHGKTVIEP SRLGLVFQSL GELGQGLQIN SSEKKSADDK 120
  121 WQQPWGEQEW IRDQHNQLTA VLSNGKVQLE VEFKAFDDGI GFRYHLAQQA TLPANSPLSI 180
  181 TDELTEFNVG QADKATAWWI PARGWNRYEY LYRTTALKEV DRVHTPFTFK LADGTHLSIH 240
  241 EAALVDFAAM TLDQQRDGKL KADLTPWSDG IRVKTQVGFY TPWRTIQIAD NATGLLNSHL 300
  301 ILNLNEPNKL GDVTWVKPGK YVGIWWGMHL NENTWGSGPT HGATTSETER YMDFAAKYQF 360
  361 DGVLVEGWNE GWDGDWFHNG DQFSFTKAYA DFDLPAITAY GAKKGVRLIG HHETAGSVTH 420
  421 YRDQMADAFA LYEKHGVTQV KTGYVADGGQ IKRIDDKGIT RHEWHDGQFM VGEYLHSVTE 480
  481 AAKHHISINS HEPIKDTGLR RTYPNWISRE GARGQEYNAW GSPPNSPEHT AMLPFTRMLA 540
  541 GPMDFTPGIF DLAPKGLDAQ NRVQTTLTKQ LALYVVLYSP IQMAADLPRN YEKHLDAFQF 600
  601 IRDVPTDWYQ SVALAGEVGD YVVFARQAKD QGDWYLGALT DETARKVTVK LDFLSPNKRY 660
  661 QAQIYRDGAK ADWKTNPYDY VIETKEVGAK DSLNLALASS GGTAIRFKVL 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle