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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|113908587, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKKPLVIAM AIALSSTALS FTLAAEENVK PVVQGDADKK LVTTEFDEVL VSATRISEKS  60
   61 SETSRSVAVV GEEQLAVAQA SSVANALKNE ANITLTNGPR ASSQGVEIRG LSGSRVLQTI 120
  121 DGARQNTDSG HRATFFMDPE LLKSIEVLRG PASSLWGSGA LGGVVAQNTK SAQDFLAPDE 180
  181 TFGGYFKQGY ETNGSRTKTS GAIYGQQDSI DWLLNGSYTD SNNIKTGNDE TLSNSASHGS 240
  241 SGLAKFGWQA DEASRLELSA RVNKINELVP SNPSAAASNS VPLVRRKTDD QNITLDYSFN 300
  301 PANNPYLDTK MQVYWNSTDY DEDRITKGQL DSTEYRTVGI NLNNSSRLGN TLLTYGVDGF 360
  361 RDTIETTRDD SGQVGQRPGN IDGETTVWGA FTRADIELTK TLNLDAGLRY DSFKNDSNNL 420
  421 NLSSDDNELS PSLGLVWQTQ SWLTLSARYD QAFRAPSVEE MYSSGTHYCI PPIPGFLPQG 480
  481 LCNTFATNPD LKSEKARNKE IKADLRFSEL AGDDELALTF NIFRNDVDDF IVQQVSNPWH 540
  541 GIPGFEQTTS WNNVEDARLT GFEISGRYRI GQTRLAMNYG QTHGEDRQTG GDIEGIPANK 600
  601 FNVDLSQGIM EGDMKLGTRV TYVATQSNTP DGYRVAKYDD YTLWDVYVAW EPTMGAMAGV 660
  661 RVDFAIENIG DEKYLQAWQT LYQPGRNMKL SARYMF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle