YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|113908884, gi...
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRINPRLLLC KASVKASKKA KPQQGFTLIE LVIGMLVIAI AIVMLTSMLF PQADRAASTL  60
   61 HRVRSAELAH SVMNEIWGKR YDQNTNANGG TPACGSPLGS NCSTSLGPEF GESRNNFNDV 120
  121 DDYNGLNETA TMLNSTQTYA NAYLNYRLSV TVAYGPAPNT KLVTINVTTP DNEVITYNMV 180
  181 RSNY

Type	Start	End	Confidence
Cytoplasmic	1	25	0.79
Transmembrane Helix	26	50	0.82
Non-Cytoplasmic	51	184	0.86