YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|113908883, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASPLSAVNK KSTLGFTLVE MVTVILILGI LVVGVSSFII FGTRIFVESS SVDQVLSQSR  60
   61 FAVERMTREL RSALPNSLRV NTDSLTYQCI EFVPIEASTT YLTMPIIPDA AASTGIVILD 120
  121 NTVSAIRVNQ FAWIYPLIDA DVYSSARQKR AQVKTIATSP SPLEHQVTLT FTAPTRFAEA 180
  181 SPRQRIYFGS SPVSYCFEKG PSGNELQLLR YAGYNFNAVQ PNPAAMPTTM GTGVLMAQSV 240
  241 ANVLNNGADL PLILTPSSLV NNAMVHLQPR FNVNGETFQY RHQVQVINVP

Type	Start	End	Confidence
Cytoplasmic	1	20	0.81
Transmembrane Helix	21	42	0.92
Non-Cytoplasmic	43	290	0.92