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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|160861980, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRRDFLKGI ASSSFVVLGG SSVLAPLNAL AKAGINEDEW LTTGSHFGAF KMKRKNGVIA  60
   61 EVKPFDLDKY PTDMINGIRG MVYNPSRVRY PMVRLDFLLK GHKSNTHQRG DFRFVRVTWD 120
  121 KALTLFKHSL DEVQTQYGPS GLHAGQTGWR ATGQLHSSTS HMQRAVGMHG NYVKKIGDYS 180
  181 TGAGQTILPY VLGSTEVYAQ GTSWPLILEH SDTIVLWSND PYKNLQVGWN AETHESFAYL 240
  241 AQLKEKVKQG KIRVISIDPV VTKTQAYLGC EQLYVNPQTD VTLMLAIAHE MISQKLYDDK 300
  301 FIQGYSLGFE EFVPYVMGTK DGVAKTPEWA APICGVEAHV IRDLAKTLVK GRTQFMMGWC 360
  361 IQRQQHGEQP YWMAAVLATM IGQIGLPGGG ISYGHHYSSI GVPSSGAAAP GAFPRNLDEN 420
  421 QKPLFDSSDF KGASSTIPVA RWIDAILEPG KTIDANGSKV VYPDIKMMIF SGNNPWNHHQ 480
  481 DRNRMKQAFH KLECVVTVDV NWTATCRFSD IVLPACTTYE RNDIDVYGAY ANRGILAMQK 540
  541 MVEPLFDSLS DFEIFTRFAA VLGKEKEYTR NMGEMEWLET LYNECKAANA GKFEMPDFAT 600
  601 FWKQGYVHFG DGEVWTRHAD FRNDPEINPL GTPSGLIEIF SRKIDQFGYD DCKGHPTWME 660
  661 KTERSHGGPG SDKHPIWLQS CHPDKRLHSQ MCESREYRET YAVNGREPVY ISPVDAKARG 720
  721 IKDGDIVRVF NDRGQLLAGA VISDNFPTGI VRIHEGAWYG PVGKDGSTEG GAEVGALCSY 780
  781 GDPNTLTLDI GTSKLAQACS AYTCLVEFEK YQGKVPKVSS FDGPIEVEI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle