YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|113948448, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKKRGVMSP LGNAVGAEEA QINAAKANIE SLKRQITTEI EKVSEDVTLS LQNLFGLESV  60
   61 GKSFLWQLAS GATATFTEAT LSYEQVRDST YVTFDVNGRD QALLNADSLQ DLDSLAFQQF 120
  121 YPAVAREVNG KLDVLDGSRR RAWFLLQNGE VDIFRILVTK DDISLSDAKA LAKQLQTAKE 180
  181 HNLREIGQQC LSLEKANPKI TQAQVAAQLG MSQAGVSKAL KAAKVDERLV KLFPVANDLS 240
  241 HTDYALLNNV MEVYEFEDEL LSFINNLTKK VVIIQSEYSR AERKSAITKA IKTELQIAKD 300
  301 MKNKALVSVT NLATFDSSGI YARKRIKGRN FAYEFGRLSL DIQQQLDVAI ADVLKKNKFN 360
  361 TRSDL

Type	Start	End	Confidence
Signal Peptide	1	17	0.55
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	365	0.99