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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|160859805, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIIKELACST LLVLTFVSAY SFGDDTELYV KESTTRTGAR PKVLVIFDNS GSMSTEEITQ  60
   61 VVDYDPNYDY PAVSGSGYSD TLIYYAVGGG GLPTPDTSSD KRYFKASLNG CSQSKAALAE 120
  121 FGRFTGYIRE FTSSGTTGVW KELPETDGRN ISVIDCWEDI SQVDPNNSSS YYDGFPANGL 180
  181 TTGSGRKKKA YPYFISSSPS STWADALAAA KNTDFGVGQP VTFYADNYLR WYWLSKAGKL 240
  241 PTVKVSRLEI AKKAISNIIS STPTVDFGLA VFNYNYPNEG NRDGGRIVSG ITQMTDSTRA 300
  301 SLLTTIDNLL AKTNTPLCET MYEAYRYFAG KGVKYGHGDT DYGSYVGNKP PYDSLVEKGG 360
  361 SYESPFKVCT DIAYVIYVTD GAPTVDKSAN NDVISLTSTG SKDGDYSSFS KNLDTASYLP 420
  421 ALASYMFNND LINKLDSSNT EQMQNVRTYT IGFSKGAEDA APLLAETAKR GGGLYFAAQN 480
  481 SIELQNALND ALSNILNIDS SFTSPSIASN NFDRTQTFDA AYYAMFLPGK GPRWSGNLKK 540
  541 LKVTADGTLV DSKGSAAIAD NGNIKDGACT IWSNCDAQKD GNKVEVGGVA AQIRTQSVRK 600
  601 IVSDLGVGSS LTPLTLANAQ SAAGGDTALA SYMRTSVDEL ANTFDWLKGI DVDDDNKDGS 660
  661 TTDKRNDVMG DPLHSKPLAL NFGSSTATDI RIMLGTNQGV LHMFKDEGDS VSETWGFIPY 720
  721 ELLPNLTELR SNDPSGVHTV YGMDSSPVAY TEMDDTGKVI KAWVYVGMRR GGSSYYALNV 780
  781 TNPDSPTLMW SINPSTEGFS DLGQTWSEPI VTKIVGYEKP VLIFGGGYDT SFDATPSSAP 840
  841 AGRAVYIVDA EKGTLIHSFG GSASGATVLS DIQDSIPNSV AILDSNNDGY TDRIYATDVG 900
  901 GNVWRMDLPS ASQSSWTAFK FAALGGSNND NRRFYAEPVV AQTMFTNLAE VKVTSGTGTT 960
  961 TTKTYQNVPY DAVVIGSGAR PHPSSTTVND MFFTLQDRNV VTKSFTGSDI PSVITINDLY1020
 1021 DVSSSAPVSE TDNISFGKKL GWFYDFSGLG EKSLTAALIV QGKVYFTSYS PPADSVAENV1080
 1081 CVVSGSGKLY VFDLHKGTRT FSQLYFELGE RVPDTPQIVI PAPETGKDPY IYIIGVGKGE1140
 1141 KNKDGEYSGT INVASGLGVN KIYYHINE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle