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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|113908202, gi...
Protein type: Transmembrane
Type Confidence: 0.74
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPKKRITMH DHAAEASLFK RRALFTFFCV FALLSVLVTN LYHLQVESYK DYETRSNDNR  60
   61 IRVVPIAPSR GLIYDRNGVL LAENLPFYSL DLVPEKISNM SETLDELGKL IEISEDERET 120
  121 FTEALKFHRR FKPLTLKNQL TEEQVAIFSV NQHKFPGISV EAGLKRNYPY GAQITHVLGY 180
  181 VGKINTRDRA QLERSDLWKN YAATKDIGKQ GIEKFYESLL HGKPGHLEEE VNNRGRAIRT 240
  241 LKIVPPEPGQ DIYLTLDLKL QQKAVELLTG LRGSIVAIDP RDGGVLAMVS SPSYDPNQFV 300
  301 QGINNKDYSA LLNDKSRPLI NRATQGQYAP ASTIKPHLAL LGLDEKVITE STRVWDPGFW 360
  361 QIPGVERKYR DWRRWGHGWV NVYSAITESC DTFFYELAYK VGVDHIARFM EQFGFGQNTG 420
  421 IDIFEESSGN MPSKEWKRLK YNQAWYIGDT ISVGIGQGYW TATPLQLANA VGIMANKGRR 480
  481 FPPHLLKSIK DNTAKIDSPI NELPPIELNS PRNWNIINEA MRQTANKSRF TDATYTAAMK 540
  541 TGTAQVIGVA ENTKYDASKI AEHFRDNALV VAYAPFEDPK IVLAVVMENA GWGGANAGPV 600
  601 ARAMLDEYML RDTWKPQP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle