YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|160863099, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLNPNTMNS LCLLRLSAIG DVCHAVAMVQ AIQRQYPELK ITWVIGKLEY QLLKHLPGIE  60
   61 FVIFDKSQGW RSYFNLRKAL KGRRFDVLLH MQVALRATLA SLAISAKVRI GFDRARAKEG 120
  121 QWLVTNRRVE PLAKPHVLEG FMGFAKAIGV NDLTPQWHIP VPIADTEFAQ TQIKDNEKVF 180
  181 IICAAASKAE RNWLPERYAA VASHAIAKGF RVMLCGGPTQ LEKDLAEQIL QACPSKIDNL 240
  241 VDKTSLAQLL ALLKRASLVL APDTGPAHMA VTQDTPVIGL YAHSNPGRTG PYLSQQYVVS 300
  301 AYDEAIASQH RGEVKWGTRA KGEHLMALIS VEAVIEKFEL VVQQTLS

Type	Start	End	Confidence
Signal Peptide	1	25	0.86
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	347	0.99