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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|113948291, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDVKATLGQV KQMRLSSFKG IGTPMVVLAA LAMIVLPIPP FLLDILFSFN IALALIVLLV  60
   61 AIYTDRPLDF AAFPTVLLVA TLLRLALNVA STRVVLLEGH NGGDAAGKVI EAFGSVVIGG 120
  121 NYAVGLVVFI ILIIINFAVV TKGAGRIAEV SARFTLDAMP GKQMAIDADL NAGTLNQDQA 180
  181 RIRRAEVTRE ADFYGAMDGA SKFVKGDAVA GIMILVINIL GGFIIGIVQH GLSFSEAVEI 240
  241 YTLLTIGDGL VAQIPGLLLS IAAALMVTRQ NESGDMGQMM MSQMFDSHKS LGIAAGVLFV 300
  301 MGIVPGMPHM AFLSFAFITA GAAYFVYKRN ESKRIKALEL VKSGPVERQD KEPKELGWDD 360
  361 VHHVDTIGLE VGYRLIPLVD KGQGGELLSR IKGVRKKLSQ ELGFLVPAVH IRDNLDLSPN 420
  421 AYRISLMGVV VGEADIRHDC ELAINPGQVY GKLDGIETRD PAFGLEAVWI APELREHAQT 480
  481 LGYTVVDAAT VVATHISQLL TNNAAKLLGY EEVQQLMDML AKHSPKLVDG FIPDVMPLGH 540
  541 VVKVMQNLLN EGVSVRDLRT IVQTLLEYGT KSNDTEVLTA AVRIALKRMI VQEISGPELE 600
  601 IPVITLAPEL EQMLHQSMQA TGGDGPNIEP GLAERMQQSL ADAAQKQEMV GQPAILLTSG 660
  661 MLRATLSRFV KHTIPNLRVI SYQEIPDEKQ IRIVSAVGQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle