YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|160862829, gi...
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLDLSQFND IDFENIGGWP NQVKSFFAIL LALCVFAAGY FLVVSDSVDT YTAEQDRELQ  60
   61 LRDDFKNKYQ LAANLKLYRE QLATMEVQFA ELLKMLPSEN EMPGLLDDLT FVATDAGLRI 120
  121 KSLDWEPEIQ RDFYIEFPIK MSVTGDYHQL GNMVSGVAKL PRIVSLHDFT IKRDDAGNLA 180
  181 MDILAKTYRF KEGAELPPEK PAKKGKK

Type	Start	End	Confidence
Cytoplasmic	1	24	0.55
Transmembrane Helix	25	44	0.89
Non-Cytoplasmic	45	207	0.64