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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|160877435, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQSGLSPRGR HNAHGPFRAI FIFSLLVLFI ATASRIALGL WQADRVAAVD GWSHLLIQGL  60
   61 RVDIATLCWL WGIAALGTAL FSGDHFIGRL WQPILRVWLT VGLWIILFLE ASTPAFIEEY 120
  121 GIRPNRLYVE YLIYPKEVLS MLWAGRKLEL IFSVLLTIGT LWGGWVLSGK LTKNLRFPRW 180
  181 YWRPVLAVLV IAMTLLGARS TLGHRPINPS MVAFADDPLV NSLVINSAYS LVFAIKQMGS 240
  241 EEDASKVYGK LDNAEIIATI RQESGRPESA FTSTDIPSLS FNQASYTGKP KNLVILLQES 300
  301 LGARFVGSLG GLPLTPNIDA LSKEGWYFDN LYATGTRSVR GIEAVTTGFT PTPARAVVKL 360
  361 GKSQVGFFSI AELLKNHGYT TQFIYGGESH FDNMRSFFLG NGFSDIIDQK DYKSPAFVGS 420
  421 WGASDEDLMR KANSEFERLH SEGKPFFSLV FSSSNHDPFE FPDDRIELYE QPKQTRNNAA 480
  481 KYADYAIGEF FKLAKNADYW KDTIFIVVAD HDSRVGGADL VPVSRFRIPG LILGDNLAPK 540
  541 RDHRIVSQID LPPTLLSLIG ISDSYPMLGR DLTQVSDDWP GRALMQYDKN FALMEGKDVV 600
  601 ILQPEKAAQG FEYNEKTEQL TPYAPAAAAL EKKALSWALW GSLAYQQELY RLPK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle