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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|113947436, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHYKKSMIGL TVTAIAIIAG CQVTHQIIKS QGTAQGKHGE VQVETTFKDG HIVAIDVLKQ  60
   61 KENKVLAGAV FKDVKQAIID NNSIEVDGIT GATVTSKALK EAVGKSIEAA GVTLVAVASA 120
  121 KKSEALTPAE YTYDVVVIGS GGAGFSAGLE AMAAGRTAVI IEKMPIIGGN SLISGAEMNV 180
  181 AGSWVQKNMG VTDSKDLFIS DTLKGGDFKG DPEMVKTMVD NAVGAAEWLR DYVKVEFYPD 240
  241 QLFQFGGHSV KRALIPKGHT GAEVISKFSI KAEEVGLPIH TNTKAEKLIQ DQTGRIVGVE 300
  301 ATHNGKTITY HAKRGVVIAT GGFSSNMKMR KKYNPELDER YGSTGHSGGT GDGIVMAEKI 360
  361 HAAAKNMGYI QSYPICSPTS GAIALIADSR FFGAVLINQK GERFVEELER RDVISQAILA 420
  421 QPGRYTYVLW NQAIEDVAHT VAMHQGELKE FTKDGLMHKV DTLEEAAKVF DIPVEKLAST 480
  481 IKDVNHYAAI GKDEAFNHRS GLVDLSKGPY WILKATPSVH HTMGGLVVDT HTRVLDEQGN 540
  541 AIPGLFAAGE VTGLTHGTNR LGGNAYTDII VFGRIAGQEA AK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle