YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|160859382, gi...
Protein type:	Transmembrane
Type Confidence:	0.71
Topology Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKQDIIFGI HAVEALLKHS PERIIELWLL QGRDDERLTV LANQAKAFGT TIQVASRKAL  60
   61 DDKAESSQHQ GIVARVKAAK VLNEQDLDVL LANTEQPFLL ILDGVTDPHN LGACLRNADA 120
  121 AGVQGIIVPK DNSVGLTATV SKVACGAAET VPLFQVTNLA RTMRHLQDKG VWIVGTAGEA 180
  181 DCELYQADLK GPLAIAMGAE DKGLRRLSRE SCDSLISIPM AGSVSSLNVS VATGICLFEA 240
  241 VRQRRS

Type	Start	End	Confidence
Non-Cytoplasmic	1	215	0.91
Transmembrane Helix	216	238	0.66
Cytoplasmic	239	246	0.56