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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|159892686, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.38
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTEVARQLED LSPERRALLA QRLRQRQAAK PVPSIPALAR IGEHPAFELS FAQQRLWFLS  60
   61 QWQPESAAYH IPATFSIAGE INVSVLQTCL DKIIQRHEVL RSTIEVLNDQ PMQVIQPFRS 120
  121 LDLELVDLRG LSNEQQASQR QQQIERHSQQ PFDLSKDLML RGLLLHTAAD HAELVLTIHH 180
  181 IACDGWSIGV LLRELGQLYE AGLRGEQLEL PALPIQYADF AVWHKRYVLE QVYQQHLNFW 240
  241 QEQLSGTLPL LNLPTDHARP AVKRDLGATV EYHLPWSLVE AVERLSRQER ATPFMLFMAA 300
  301 FQVLLYRYSG QSDLIIGTPI ANRTRREIEN LIGFFVNTLP IRVNLAGSPS FRSLIAQVRQ 360
  361 TSLAAFEHQD MPLEHLIDVL KVERSLSHNP LFQALFVHQT TSIQTVDSGE FGLQFGGAIE 420
  421 TGSAKFDINL NLAANRATFE YNTDLFERST IERMASHFHS LLEYAVTNPD ASIEHLPLLS 480
  481 SSERQQLLQT WNSTSANYPA VDSIVRLFEA QAARVPERTA LHFEGQTLSY AELNQRANQL 540
  541 AHSLRQRGIG CDMRVGLFID RSLDLLVGAL GILKAGAAYV PIDPIYPQDR ISAMLEDGAV 600
  601 SLLLTHAELA AELPKLDLEV LCLDQAWPTI AQAPTHNLNL ALEPRSLMYV LFTSGSTGRP 660
  661 KGVAIEHHNY VNYIQGLLQR IEAEDGWSYA LVSTFAADLG TTNVYGALCS GGELHIVAYE 720
  721 RATDPEAFAA YFRQHRIDVM KLVPSHFEAM RGLNNLADVI PKQRLILAGE ASLWEQLSDI 780
  781 RQLQPSVQLQ NHYGPTETTV SMLTYPIPSQ PHYPSSTVPL GRPLGNVQIY VLDRRMQPTP 840
  841 QGVPGELYVG GAGVGRGYIG RPDLTAERFV PNPFSTEAGA RLYRSGDLVR YQPDGAIEFL 900
  901 GRIDLQVKIR GYRVELSEIE TAIQAQAQVA NSVVILREDT PGDKRLVAYI VPEAGQSLNI 960
  961 GSIREALRNS LPDYMVPTAF VELDGLPLNP NGKIERRALP APSNERNLDS YVAPQTATEH1020
 1021 ELAGIWAEVL GLDQVGIDDN FFDLGGESFK AIRVVRKIGS HISVMTLFKY PTVRELAAHL1080
 1081 SGASSAESGG MLYELSKAQA KQHTTIVAIP YGGGSAITYQ PLAQAMPKGY RLLAAELPGH1140
 1141 DFSRPDEPLQ ALEVVASQLA SEIQTKTQGP IVLYGHCVGS AMTVEIGRLL EQAGRDVQGI1200
 1201 VLGGNFPAAR VPGRFFEWLN KLMPADRWMS DRTYRDFLRA LGGFTEIVDQ AEQTFVMRSL1260
 1261 RHDAREVERY FTQAFAQKQS QQLKAPIACI IGEMDRATEY YQERYREWEY FSNNVTLHVI1320
 1321 PHAGHYFLKH QASELGQIIE QQTEQWQQPR PIQPTAAKSK SHKTSMPSLR IFFMVALGQL1380
 1381 VSMLGSSLSS FALGIWIYQR TGTVSDFAFT AIASMLPSLL VSPLAGAIAD RWDRRWIMII1440
 1441 ADTISALSTI VIAMLLWANK LEVWHIYLTA AISSIAGTFQ RPAYAAAMTQ LVPKQYLGHA1500
 1501 NGVIQLGSAT GGLIAPFIAG GMVAFFGLGG VFLLDFISFS LGIGVLFLVR FPNTLYHKRE1560
 1561 EPLLREIVRG WEYIIKRPSL VAMVLFFALG NIWFGIASIS MSPLVLSFGG PAELGIVSAA1620
 1621 CALGGFLGGL FMSLWGGLQR RAEGMVGFVI LEGFFIALAG LRPSVWLVAL AMFGMWFAIS1680
 1681 LVNAHWQVLI QTKVGLELQG RVQATNQMLA MLSIPLGYWL AGPLADNLFG PLLEPNGALS1740
 1741 SSLGWLFGVG PDRGIGLLMV VVGLGAAIWA LIGFNYRPLR YMEDALPDAI PDAEIASDRD1800
 1801 TIQAQADGII AVTAKG

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