YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|113938965, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTGVLSFYRT SIGKKVVMAV TGLIGVGFVI GHMLGNLQIY LGAEALNKYA AFLKSTGELL  60
   61 VVVRVVLLTA VILHIIAAVQ LTIENRKSRP QRYVKKQHVE STFASRTMRY GGIILLLFIV 120
  121 YHILHFTIGK APGGPQPFDV HNVYNNVVYG FQNIWVSLFY IVAMLSLGLH MAHGVWSLFQ 180
  181 TLGLNNRRFN RLLRNAALGI GTLLFLGNIS IPIAVLVGFL KPI

Type	Start	End	Confidence
Cytoplasmic	1	15	0.92
Transmembrane Helix	16	35	0.93
Non-Cytoplasmic	36	59	0.90
Transmembrane Helix	60	83	0.90
Cytoplasmic	84	106	0.94
Transmembrane Helix	107	128	0.87
Non-Cytoplasmic	129	155	0.91
Transmembrane Helix	156	177	0.90
Cytoplasmic	178	195	0.87
Transmembrane Helix	196	219	0.89
Non-Cytoplasmic	220	223	0.90