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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|167346630, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGDDRHIFH DPTGRRDRRM RLILGIVLSA LAAIVAGFLA TLAFAPRLPS VTLRDPHVLS  60
   61 SLHKETAHRL KPALAWRQVP RPTAGAQGTG GGSAQVRPIS VGFYVSWDED SRESLRRNID 120
  121 KLDVVSPQWV ALKGPAGDIV VDDDPQGVAR IAAAPNHPAV LPLVHNSANA AFNGPLADAL 180
  181 LADPKARAKL IASLADLAVK RGYGGYVFDL ESLSAKGLVN YPKLLDEARA ALKPQGREVW 240
  241 VTAPFDEEGW PLKRLQDSSD TLVLMAYDQH YAFGDPGPNA GQDWYESELA KRFAKLDPAR 300
  301 TIMALGAYGY DWTLNKNGKP ASGSPATFHE AMRNAQDAGA TIDMDDDALN PTYDYVDDNG 360
  361 DSHVVWFLDA TTLFNQVKVT DAWKPRGYGL WRMGMEDPGV WSVLGKPYGQ ASAAGLTRIP 420
  421 AGQSVDFDGG GEVLHVSALP TPGKRILEFD PDTGLISDQT YAAIPSSYVI ERYGQKPGLV 480
  481 ALTFDDGPDA RWTPKILDVL KAKKAPATFF VIGENMQARP DLVKREVAEG HDVGSHTWTH 540
  541 PNIGETPVGQ TDVELNATQR LFEVITGRSM RLFRPPFFGD AEPSTPHEVA PLVIAQTLGY 600
  601 LIVGLRIDPD DWQKPPPQAI IDRALERLDH PGDRPGQVIL LHDAGGNRAN TVKALPQLID 660
  661 QIRARGYRLV TVGELAGMTP TQTMPVSDRD PLALALDRMG FGLFRGVKVA LTALFLTAIA 720
  721 LGLARLVFLA CLALVHRWTH QSPENLDPET GPLVSVLIPC FNEEKVIAAS VARILESEWK 780
  781 NLEVLVLDDG SKDNTAQEVR RAHGDDPRVT LLSFENGGKA RAVNRGLAIA KGDYVVALDA 840
  841 DTLFPPKTIG RLIRWFQDPT IGAVAGNAIV GNRVNMVTRW QALEYVTAQN LERRALAALG 900
  901 AVTVVPGAVG AWRKSVLDAL GGYPSDTLAE DQDLTIACQR AGWKVAFDPA AQAFTEAPDT 960
  961 VGGLLKQRFR WSFGTLQCVW KHRAALFSPK TPALGFVALP QIWLFQILLA VAAPLVDLAV1020
 1021 VWSLISGVYG AIAHPVEWSP DDTIQGLLYW AVFILVDLSA GALGMALEKR APWADLPYLP1080
 1081 VQRFGYRQLM YYVVVKSVLT AARGGRVGWG KLERRATATV KSGG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle