YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|150027420, gi...
Protein type:	Transmembrane
Type Confidence:	0.81
Topology Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEKTEAKQS GLWENVKVIV QALLLAVVIR TVFFQPFTIP SGSMMPTLLV GDYIFVNKFA  60
   61 YGYSKYSLPF SPNLFSGRIF ASEPERGDIV VFRFPPNPDI DYIKRLVGLP GDRLQVRNSI 120
  121 LYVNDKAVER VPAGPFRADD QYDTGGDVPV YRETMDNGMT YETLDQFPDS RGDNTREFIV 180
  181 PEGHYFMMGD NRDNSADSRF DVGFVPAENL VGRASLIFFS LGNDTSFRQI WKWPANLRYD 240
  241 RLFKVVN

Type	Start	End	Confidence
Cytoplasmic	1	15	0.70
Transmembrane Helix	16	34	0.72
Non-Cytoplasmic	35	247	0.81