YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|150395836, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTPAAVLSTA SGLALVLLSL ALLMTVLRIV RGPTLPDRVL GLDMLVAIAI GLIAVIAVRT  60
   61 GFYLYIDIAI ALGLVGFLAT VAFARFILTR GLAPERMSPG ATDVSRPNPS PARPRPGQAG 120
  121 RRKRKGAR

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.89
Transmembrane Helix	7	30	0.88
Cytoplasmic	31	38	0.93
Transmembrane Helix	39	58	0.95
Non-Cytoplasmic	59	67	0.64
Transmembrane Helix	68	88	0.96
Cytoplasmic	89	128	0.98