YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|150378125, gi...
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASLNKHRAR LSPVAFLKAM SRTAVDHAPA AGGAAVWSIV CSGPATAQVT GGTDPATMVN  60
   61 NICAFILGPF GQSLAVLGIV AIGISWMFGR ASLGLVAGVI GGIVIMFGAS FLGKALIGAG 120
  121

Type	Start	End	Confidence
Cytoplasmic	1	26	0.77
Transmembrane Helix	27	47	0.73
Non-Cytoplasmic	48	61	0.73
Transmembrane Helix	62	86	0.85
Cytoplasmic	87	92	0.65
Transmembrane Helix	93	117	0.86
Non-Cytoplasmic	118	120	0.77