YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|113722308, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFTQLTVTT IAACLIMQAP ARAQFVVTDP GNTYQAAITA GTTILNYAKT AQMLEQTIAM  60
   61 VGMFTTNFAV TGLLSQINQG NKYPSTNKLS EQMFDSQRPV SATARAIATD RDRAIDGSDA 120
  121 HAELLRGQIT GAANAASVAA DNLELMDKRL RENGNTLGQL SRSRNIMQAT VTNGLLLKQI 180
  181 HDAIIQNSQA TSLLTMATAQ ASLHAAEEAA AQRRERLETA KIFSPGL

Type	Start	End	Confidence
Signal Peptide	1	23	0.99
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	227	0.99