YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|150396095, gi...
Protein type:	Transmembrane
Type Confidence:	0.60
Topology Confidence:	0.47
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRNPVDTAMA LVPMVVEQTN RGERSYDIYS RLLKERIIFL TGPVEDHMAT LVCAQLLFLE  60
   61 AENPKKEIAL YINSPGGVVT AGMAIYDTMQ FIKPAVSTLC IGQAASMGSL LLAAGHKDMR 120
  121 FATPNSRIMV HQPSGGFQGQ ASDIERHARD ILKMKRRLNE VYVKHCGRTY EEVEQTLDRD 180
  181 HFMSSDEALD WGLIDKVITS RDAVEGME

Type	Start	End	Confidence
Cytoplasmic	1	67	0.54
Transmembrane Helix	68	86	0.47
Non-Cytoplasmic	87	94	0.77
Transmembrane Helix	95	115	0.53
Cytoplasmic	116	208	0.50