YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|150376881, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNGLSKLGR GLSWLGTLSL WTAGVGLVAM TLIVAWQVFC RYVLNDSPSW TEPGAVMLMS  60
   61 WFIFLGAAVG VRENYHLGFD VLLYVVPKSG KIWLRMISDL VALAFGFGMI WYGAQLVALT 120
  121 WNTVLPSLQI SGGWSYVPLV AGGVLICLFA LERIVLRLAG EPIDDVLDEM PPAEVAADLE 180
  181 TAQIKA

Type	Start	End	Confidence
Cytoplasmic	1	13	0.92
Transmembrane Helix	14	36	0.89
Non-Cytoplasmic	37	53	0.81
Transmembrane Helix	54	71	0.94
Cytoplasmic	72	91	0.87
Transmembrane Helix	92	114	0.88
Non-Cytoplasmic	115	131	0.83
Transmembrane Helix	132	151	0.93
Cytoplasmic	152	186	0.96