YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|150031655, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRHFSVVSAI VIFGLVLSGC GFGGDRPSRE TTSSVRPASP VPSAEVSAVA AKSAPEALAW  60
   61 AGPVPEPQAF TSAQRTVGMP VPAERPLAML APENPAGPRG GRTRVYSHSF RDAHPINFGK 120
  121 RSPRKMAVHG VDVSRWQGDI NWAKLRSQGA NFAYIKATDG GDHLDPMFKK NWRRANEAGL 180
  181 KRGAYHFFYW CRTAGEQADW FIRNVPRDPT ALPPVIDVEW NGESSCKRRP SRERVLEKMQ 240
  241 VFMDKLERHY GQRPIIYTAP DFYRDNLQGA FPNHPFWLRS VAAHPSKVYP GRKWVFWQYS 300
  301 GSGLSHGVEG RIDLNVFNGS EEDWHNWVAA RSS

Type	Start	End	Confidence
Signal Peptide	1	23	0.92
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	333	0.99