YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|113725765, gi...
Protein type:	Transmembrane
Type Confidence:	0.92
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MITQSPGSGS EASSDGNRST ERGSEEVPPR PQHRTRYRAG VPCRHFLRRH AGQGRRRHGE  60
   61 LKALRMADTG QSDRKERSNG VIVGTCLAFV VGMVGMAYAA VPLYDMFCRV TGYNGTTQRV 120
  121 EQESDLILDE KVKVTFDANV AAGLPWEFAP VQRDIDVRIG ETVQITYRAR NLASTPTTGQ 180
  181 ATFNVTPMAA GAYFNKVQCF CFTETTLQPG EEMEMPVVFF VDPEIVKTVE TKGIKTLTLS 240
  241 YTFYPREPSK PVAQVKSRTE NKL

Type	Start	End	Confidence
Cytoplasmic	1	79	0.89
Transmembrane Helix	80	101	0.87
Non-Cytoplasmic	102	263	0.96