YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|94499909, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLNKLFAAM GLVASALSLN AAAIEVDKDI PEYTKSSGVS GNFSSVGSDT LANMMTLWAE  60
   61 EFKRQYPNVN IQIQAAGSST APPALTEGTA HVGPMSRKMK DKEIEAFENK FGYKPTAVPV 120
  121 AIDALAVFVN KDNPVKGLTM AEVDAIFSST RKCGLAKGFD TWGDAGLTGV WSSKKIELYG 180
  181 RNSVSGTYGY FKKKALCKGD FKNTVKEQPG SASVVQAVSS SLNGVGYSGM GYTTSSVRAV 240
  241 PLSKKGGQFI EATPENAVTG AYPLSRFLYT YVNKKPNEKL QPLEREFLKL VLSQQGQKIV 300
  301 AKDGYIPLPA KVVERTMKQL DL

Type	Start	End	Confidence
Signal Peptide	1	23	0.96
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	322	0.99