YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|94426764, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNESMSIWSL IANASWVVQG VMLVLVAAVF ISWTIIIQRH RLLTAVKDGY EDFEDRFWSG  60
   61 MDLSQLYKEI NQEPPAFGVE NIFAAGFREF SRLRQQGGDP EAIIQGTQRA MRVATTKEAE 120
  121 LLENHLPFLA TVGSTSPYVG LFGTVWGIMN SFRGLANVQQ ATLAVVAPGI AEALIATAIG 180
  181 LFAAIPAVIF YNRFTTKVDQ ITSHYETFAE EFISILHRQV YKKNKTQAVA E

Type	Start	End	Confidence
Non-Cytoplasmic	1	14	0.89
Transmembrane Helix	15	37	0.92
Cytoplasmic	38	125	0.95
Transmembrane Helix	126	148	0.85
Non-Cytoplasmic	149	168	0.77
Transmembrane Helix	169	191	0.86
Cytoplasmic	192	231	0.92