YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|165916959, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERAIFIVLV SLLGASIAFG ADSPNEYYGT GLCGKSGFEC IKVQRGQSWQ NLFPDENQRD  60
   61 LVQRLNRTDT YLYPGKTLAV PKDLKDATIY SISPFPLRIK KLGEKLIMVN QDQLAWGAYD 120
  121 PEGQLIKWGP ISSGKNYCRD VNRSCETITG IFYVFHKKGP GCKSNVFPVE TSGGAVMPYC 180
  181 MFFFKGYALH GSNEVTGYRD SHGCVRLFKR DAKWLNENFV NVATKDGHLG TKVVVEKLTI 240
  241 GE

Type	Start	End	Confidence
Signal Peptide	1	20	0.99
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	242	0.99