YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|120576026, gi...
Protein type:	Transmembrane
Type Confidence:	0.80
Topology Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLLSVLGVG VAYAAPVTAQ APHPGGFWSM LWLPLLLILV FYFLLIRPQT KRAKEHRQLL  60
   61 EGISLGDEVV TTGGVVARVS RLKDNFVVLE ISKGTEITVQ KASIASVLPK GTIDSI

Type	Start	End	Confidence
Non-Cytoplasmic	1	27	0.62
Transmembrane Helix	28	46	0.89
Cytoplasmic	47	116	0.92