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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|94491843
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHCASCVASI ESALKNVAGV KSVSINFATK QAEVEGDVDV KTILKAIKDQ GYEAEIAGDD  60
   61 EEAQNEAQSH FRDLLKKAIF AAVVGFPLMI NEFWAWLPSV NQPRIQWVWV IIGVLSFFVL 120
  121 YYCGGHIYRG AWRAFLKRQT NMDTLVAMGT GTAWLYSFIV VLIPMWIPPM ARHAYFDTST 180
  181 ILIAFITFGA ALEIRARGKT GEAIKRLIGL QPKTARVIRD DQEIDIPIAE VQIDDHLRVR 240
  241 PGEKIPVDGK IIEGASPIDE SMLTGEPLPV VKSQDDEVIG GTINKSGTFI YRATRVGKDT 300
  301 ALAQIIALVK RAQNSKPKIG RIVDKVSAVF VPVVIIVAIL TAIGWLNFGP EPKAAFVLIT 360
  361 TVAVLVIACP CALGLATPIS IIVGVGKGAE MGVLIRNGDA LQMASQLTAI ILDKTGTVTE 420
  421 GKPMLSDFYT ADGFDEKKLL SIAASVEKGS EHPLANAIIE GAKKYNIPLA NATQFESIAG 480
  481 HGVKAKIENQ SILLGNLHLM KNEKVELGGA PAHAERMADQ GQTPIYIALD GKIAGIVSIV 540
  541 DPIKPDSQKA IADLQRAGLK VVMVTGDNPL TANAVAKQVG IEQVIAEVLP EDKAKKVKLL 600
  601 QQQGERVAMV GDGINDAPAL AAADVGFAIG TGTDVAIESA DIALISGSLT GVVNAISISK 660
  661 ATLRNIKQNL FGAFIYNTLG IPIAAGVFYP LTGLLLSPII AGAAMALSSV TVVANANRLR 720
  721 FFRRRKRT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle