YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|94499405, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKKILVTGG AGFIGSAVVR HILNDTHDSV VNLDKLTYAG NLESLNEIAG SERYAFEQVD  60
   61 ICDRPALERV FAEHKPDAIM HLAAESHVDR SIDGPAAFIE TNIVGTYTLL EVARAYWNGL 120
  121 PEKQKNSFRF HHISTDEVYG DLENPEDLFT EETAYAPSSP YSASKASSDH LVRAWKRTYG 180
  181 FPTIITNCSN NYGPYHFPEK LIPLVILNAL EGKELPIYGK GDQVRDWLYV EDHARALYKV 240
  241 VTEGQIGETY NIGGHNEKQN IEVVQTICEL LEELVPENAY SRMGGNPSGF KGLIAYVEDR 300
  301 PGHDLRYAID ASKIQKELGW TPLETFESGI RKTVEWYLSN KEWVQHVQDG SYQRERLGVS 360
  361 V

Type	Start	End	Confidence
Signal Peptide	1	17	0.77
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	361	0.99