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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|94417853, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNDMANSPMN SSLAPERIDF NTPALQRKRR LRALKDRLTR WYVLVGGLAV LAAITLIFFY  60
   61 LAYVVLPLFR GADLETREAL TPAWMQQAQA PLLLSIEEQN QVAMRVGSQG EILFFNAKTG 120
  121 VELKRVALPL PAGSEIRSIA QDQPGSPTVA LGLSNGQVLV FQHTYKVTYP DNKKTITPEI 180
  181 AFPYGETPIS LDPQARPLDH VSINAGDDSL LLAGSVDRQL LLLSMTREEN MLTGESTLDQ 240
  241 ERIELPQIAE PVKAIYLDPR KQWLYVINGR ATADVFDLHS RQLNGRYKLL EDPGAAVTAS 300
  301 TQLLGGISLL VGDSKGGIAQ WFMARDTDGE PRLSHVRDFK LDGAPISAIA PEQRRKGFIA 360
  361 LDEKGNLGVF HSTAHRTLLV QPVADSSGVI SLSPRANRLL LEQGGKLHRF TLDNPHPEIS 420
  421 WSALWGKVWY ESYDKPAYVW QSTAATTDFE PKLSLSPLTF GTLKAAFYAM ILAAPLAIAA 480
  481 AVYTAYFMAP AMRRKVKPVI ELMEALPTVI LGFFAGLFLA PYVEGHLPGV FSLLLLTPLG 540
  541 ILLAGLLWSR LPERIRLSLP AGWEAALLIP VVIAVGAFAL WLSPHLETTF FGGDMRLWLS 600
  601 HDLGITYDQR NALIVGLAMG FAVIPNIFSI AEDAIFSVPR SLTYGSLALG ATPWQTLTRV 660
  661 VILTASPGIF SALMIGMGRA VGETMIVLMA TGNTPVMELN IFEGMRTLAA NVAVEMPESE 720
  721 VGGSHYRVLF LSALVLLTFT FVMNTLAELI RQRLRKKYAS L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle