YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|150961051, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAKKRGLGR GLDALLGGSS PAKLQEEAVQ ADRRELQQIP LDLMQRGKYQ PRRDMDPQAL  60
   61 EELAQSIRAQ GVMQPIVVRP IANGRYEIIA GERRWRASQQ AGLEKIPALV RDVPDEAAIA 120
  121 MALIENIQRE DLNPIEEAAA LQRLQQEFQL TQQQVAEAVG KSRATITNLL RLIGLPDEIK 180
  181 TLLSHGDLEM GHARALLGLP VERQVEGARH VVAHGLTVRQ TEALVRQWSH APGKPAGPVK 240
  241 SDPDIARLEQ RLAERLGASV QIRHGQKGKG QLVIRYSSLD ELQGVLAHIR

Type	Start	End	Confidence
Signal Peptide	1	22	0.58
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	290	0.99