YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|94416916, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQREIRPSA RAWVRYCLQG VGFLSVALGV IGIFLPVLPT TPFLLLAAAC FMRSSPRFYH  60
   61 WLVNHPRLGP WIRDYLDGEG IPLKGKVYAI GLMWASIALS CYLVRRPWAQ GFMLTSAVLV 120
  121 SIYILRQKTR PPRGA

Type	Start	End	Confidence
Cytoplasmic	1	15	0.87
Transmembrane Helix	16	35	0.94
Non-Cytoplasmic	36	42	0.66
Transmembrane Helix	43	61	0.73
Cytoplasmic	62	81	0.68
Transmembrane Helix	82	103	0.74
Non-Cytoplasmic	104	107	0.65
Transmembrane Helix	108	125	0.83
Cytoplasmic	126	135	0.82