YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	UPPP_PSEA7
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEWWTAFQAF ILGVVEGLTE FLPISSTGHQ IIVADLIGFG GERAKAFNII IQLAAILAVV  60
   61 WEFRGKIFQV VRDLPSQHQA QRFTVNLLIA FFPAVILGVL FADLIHEWLF NPITVALALV 120
  121 VGGVIMLWAE RRQHVIRAEH VDDMTWKDAL KIGCAQCLAM VPGTSRSGAT IIGGLLFGLS 180
  181 RKAATEFSFF LAMPTMVGAA VYSGYKYREL FRPEDLPVFA VGFVTSFVFA MVAVRALLKF 240
  241 IGNHSYAAFA WYRIAFGLLI LATWQFHLID WSTAGDL

Type	Start	End	Confidence
Cytoplasmic	1	8	0.77
Transmembrane Helix	9	29	0.77
Non-Cytoplasmic	30	43	0.79
Transmembrane Helix	44	63	0.87
Cytoplasmic	64	82	0.89
Transmembrane Helix	83	102	0.96
Non-Cytoplasmic	103	108	0.75
Transmembrane Helix	109	129	0.93
Cytoplasmic	130	183	0.82
Transmembrane Helix	184	205	0.83
Non-Cytoplasmic	206	215	0.68
Transmembrane Helix	216	238	0.91
Cytoplasmic	239	248	0.67
Transmembrane Helix	249	269	0.93
Non-Cytoplasmic	270	277	0.71