YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|94416235
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLAALLSCL PLVAWADNPV KLDTPVSGWR AGDGSAANYR QVVNYPASSV NVAADQATTA  60
   61 RIRGAIAAQS KDRPATLVVN GVSMPLKVDA DGSFDRPFAF PSGSNSVEVR NAAGQSRRVQ 120
  121 FYHGGGGGEV PAKLRVLLSW DSDNTDLDLH LVTPDGEHVW YGNRSLANGA TLDVDVTTGY 180
  181 GPEIIATPTP QKGPYLVYVN YFGGGYGSSE DGAEQAAQDL TTARITLVTE EGTPNEKQET 240
  241 FLVPMRKPGE LTLVKRFSYP

Type	Start	End	Confidence
Signal Peptide	1	16	0.99
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	260	0.99