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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|150960090, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSALHQIGK TSLAAALSGA ILLSAQTTQA AALSVSQQPL MLVQGVAPNL LVTLDDSGSM  60
   61 AFAYAPDSIS SYRDSTFFAS NSFNPMYFDP NTEYKLPKKL TLVNGQVQIQ DYPAPSFTYA 120
  121 WRNGFTRAGG IDLSRNYKVT VEYGRGYDRE STIRPAAAFY YEFTGSSNCS RTNQNCYTRR 180
  181 SVSTEQRQNF ANWYSFYRTR ALATQTAANL AFYSLPENIR VSWQMLNNSS CNQMGSGSSN 240
  241 GNCFNNYLRD FNGQHRVNFF NWLENLSVEG GTPLRRAMTR AGDFLRRTGV NGPYAYRPGE 300
  301 QTAPEYSCRG SYHILMTDGL WNSDSANVGN ADSNSRTLPD GQHYSSQAPY KDNASNTLAD 360
  361 LAFHYWANDA RPDIEDNLNP FITYPDKANP SAEYWNPRND PATWQHMVTY TLGLGLTTTL 420
  421 ISPKWEGSTY AGGYQDIQAG RLNWPSAAVD SANNVYDLWH AAVNSRGEFF SADSPDQLVA 480
  481 AFQAIVNRIS GGPLPASRPA ISSSLQEDAT GDKQIRHAYQ TSFASDQNWA GDLTRYSLTS 540
  541 QDKVTVQTKL WSAQAILDAM PNGGAGRKIM MAGSGSNGLK EFSWTSLSAD QQRQLNRDPD 600
  601 RNDVADSKGQ DRVAFLRGDR SKENSDNFRT RNSILGDIIN SSPATVAKAQ YLTYLAQPIE 660
  661 PSGNYAQFAE AQKTRAPRVY VGANDGMLHG FDTDGNETFA FIPSAVFEKL HKLTARGYQG 720
  721 GAHQFYVDGS PVVADAFFGG AWHTVLIGSL RAGGKGLFAL DVTDPGNIKL LWELGVDEEP 780
  781 DLGYSFPKPT VARLHNGKWA VVTGNGYSSL NDKAALLIID LETGAVTRKL EVTGKAGVPN 840
  841 GLSTPRLADN NSDGVADYAY AGDLQGNLWR FDLIAGKVDQ NDPFSRANDG PAVASSFKVS 900
  901 FGGQPLYSAV DSNGAAQAIT AAPSLVRHPT RKGYIVIFGT GKYFENSDAR ADTSRAQTLY 960
  961 GIWDQQTKGE AAGSTPRLSR GNLRQQTLDL QADSTFVSTA RTIRLASQHP VDWQSQSGWY1020
 1021 LDFMVNGTLK GEMLIEDMIA IGQVVLLQTI TPNDDPCNDG ASNWTYGLDP YTGGRTNFTV1080
 1081 FDLARQGVVD SKSDYSYNKQ NVVVSGTEQK GLGGLTLSTN EQGNPEVCSS GECLTVNPGP1140
 1141 NTRGRQNWRP IEGKN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle