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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|94415653, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.85
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLKSIQFSV AALAGASVLS VVVVLVLYAL FAGARTQELV QQRTQGLLEK VINERLVALA  60
   61 RAQVSQIQRE LEYPLTVVHG LANSTRLLGE PGTDGMPQLN ASRDEISALL RSTVQNNPKL 120
  121 LDTFMAWEPD AFGSDAAFAG QTGKGYAPDG RYLPWWYRGA DGQPIVESMV GTIDSEKLLP 180
  181 TGVRENEFYA CPKERKRPCI VDPAPYEMGG RTVMMSSFNV PIMVGGQFRG AVGADLSLAF 240
  241 IQDLLKRADQ QLYDGAGEMA LIASNGRLVA YTRDDGKLGE PVSSVLDSNE VDNLKNLSLD 300
  301 QPLYDVDAEH GHIELFLPFT IADTGVRWTL MLQIPQTAVF GELQQLQADL SSQRQQDILG 360
  361 MSLAGLVVAA LGLLVVWLVG YGIARPLRQL VGMLDDIAQG EGDLTRRLSS ERADELGSIA 420
  421 NGFNTFLGKL QNMIGQVVQS VQKVSDSSEH TADIAIRTNQ GVQQQLAEIE LVATAVHEMT 480
  481 ATAQDVARNA THAAEAANHA DQAAHQGKQI VESSSAAIQA LAGEIGRAVG VVQNLAKDSE 540
  541 NINAILVAIR GIAEQTNLLA LNAAIEAARA GEQGRGFAVV ADEVRNLAQK TQQATEEIQS 600
  601 MIQQLQQGTR DVVKVMQDSQ DRTDDSVRHA RQAAEALESI TQAVSVINDM NTQIASAAEE 660
  661 QSAVAEDINR NVSNIGQVAN QVAGGADEAS QASAELTRLA EQQRRLVNQF KV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle