YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|94415452, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTLVSSTLA FSLSLAIGAA QAEELSGTLK KVADNGTITL GYRDASVPFS YLGDNSGRPM  60
   61 GYSVDLAGKV VERLKATLGK PELRVKYNLV TSQTRIPLVQ NGTVDLECGS TGVTAERQKQ 120
  121 VAFSYGFIYV KGQLLTRKDS GIAHFDDLKG RNVVTTAGTT NERYLKNYNA EHKLGMNVVS 180
  181 AKDHGEAFQM LQSGRAVAFY MDDALLYGER AKARQPHDWV VVGEPQSREI YSCMVRKDDP 240
  241 QFLALVNETL AGLYRSGEIQ GIYQRWFQQP IPPKGLNLEF PMTSELKAIL EKPTSDPVQ

Type	Start	End	Confidence
Signal Peptide	1	22	0.99
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	299	0.99