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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|150960001, gi...
Protein type: Transmembrane
Type Confidence: 0.49
Topology Confidence: 0.44
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRKRSHAPS RISEGRPFPL GATWDGLGVN FALFSAHATR VELCLFDARG EKEIERIELP  60
   61 EYTDEIWHGY LPDAHPGQIY GYRVHGPYEP DAGHRFNPNK LLLDPYAKQL VGRLRWSEAL 120
  121 FGYTIGAADA DLSFDERDSA PFVPKSKVID PAFTWAERPP VRVPWDRTVI YEAHLRGLSM 180
  181 RHPQVPEAVR GTLAGLMNAE LLAHIRRLGV TSVELLPIHG FVDDKHLLEN GMSNYWGYNS 240
  241 IAFFAPHPAY LASGQVNEFK EMVAHLHDAG LELILDVVYN HTAEGNELGP TLCMRGIDNA 300
  301 SYYRLMPEQR RYYINDSGTG NTLDLSHPCV LQMVTDSLRY WATEMRVDGF RFDLATILGR 360
  361 HPDGFDERHG FLVACRQDPV LSQCKLIAEP WDCGPGGYQV GGFPPGWAEW NDRFRDCVRA 420
  421 YWRGDDGMLP ELARRLTASG DLYDQRGRRP YASVNFVTAH DGFTLRDVVS YDHKHNEANG 480
  481 ENNADGSDHN LSWNHGCEGP TDDPEIRALR LRQMRNLLST LLLSQGTPML VAGDEFSRTQ 540
  541 QGNNNVYCQD NELGWIDWRL DDEGRSLLAF TQRLLALRQR YPILRRGRFL VGEYNQALGV 600
  601 KDVTWLAPGG EEMTEEHWHD EHARCLGVLL DGRAQPTGIL RSGEDATLLL ILNAYHDAVS 660
  661 FRLPEVAEGS GWNCLLDTQR PEEPLGEGYA FASEFLVGGR SFLLFELQPP GTGAQG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle