YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|94413740, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.80
Topology Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRTVLVLNG PNLNLLGTRE PRTYGRQTLA GIAAQCAAFA ESRGFAVEFR QTNHEGELLD  60
   61 WIHQARGRIA GLVINPAAWT HTSVALRDAL AAVELPVLEV HLSNVHQREP FRHHSHVSPL 120
  121 ATGVICGLGG LGYRLALEYF ASQFEAAA

Type	Start	End	Confidence
Cytoplasmic	1	115	0.67
Transmembrane Helix	116	137	0.72
Non-Cytoplasmic	138	148	0.83