YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|94413158
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.56
Topology Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLRRLSIQW KITLLAGLCL LGVVALLVGL SVYRMQHSSV LVKSASTQML DESARLRLAA  60
   61 RGELQALRIQ RYFMDAFQYG KGFSRQILFL RDQAQKRFLD AYDLREDLTR QVRTALAANP 120
  121 EVLGLYVVFE PNALDGKDEL FVDQPALGSN DKGRFSLYWA QATPGQLESE SMVESELADT 180
  181 STGPSGAPYN AWYTCPKESG QPCVLDPYFD KVGERQLLMT SIAFPLELDG KVIGVMGLDI 240
  241 NLSSLQALSE QGNRELYDGV GRVGILSPAG LFAGNSHDAG LLGQNLAKAD PQHAGELLQL 300
  301 LAAGKSQLFN ESDDLKVLQP LQPIPGAKPW GVLLEVPKSA LLGPALALER QLDDMRREGT 360
  361 WVELGLGLGA AVLGLLVLWL TARGVTRPIL GVAHMLRDIA SGEGDLTQRL PHTGRDELGE 420
  421 LAGWFNRFLD KLQPIIRDVK VSVRDARSTA DQSAAISSQT SAGMQQQFRE IDQVATASHE 480
  481 MTATAQDVAR SAAQAADAAR GADQATRDGL ALIDRTTQGI DSLAANLTGA MGQVEQLASS 540
  541 SEEIGSVLEV IRAIAEQTNL LALNAAIEAA RAGDAGRGFA VVADEVRNLA RRTQDSVEQI 600
  601 RGVIEGLQQG TRDVVDAMHG SHRQAQGSVE QVEEAVAALQ RIGEAVTVIN DMNLQIASAA 660
  661 EEQSSVAEEI NRNVAAIRDV TESLSSQAEE SAQVSQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle