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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|150962859, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.40
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQRLQAVLLL CLACCWPGLA TALTLSPEER AWLAEHPELR LGIGTSWPPF EFRDAQGHYQ  60
   61 GLAANYIALL QERLRVSMTP VEPRSRTQVL EQARAGRLDL LPGIMATPER QEYLTFPRPY 120
  121 LDFPIIILAR KNGPLPKRID ELYGLKVAVV DHYAPHELLV ARHPDLTLLP LPSVAAALQA 180
  181 LATGQADAFV GDFASSVWNL RQLKLSGLEI SGETPYRYQL AMAVPRGEPI LAGIIDKVFA 240
  241 DLRAEEIDRL QAPWVGGLLD RRPAWGALAR YGIPVALLIL VSVAVLLAMN RRLRREVSRR 300
  301 RQLEQDLRDS EQHYRGLVES LNAIAWEMRL TENRFTYVSP HAERLLGYPL AEWLEPGFWQ 360
  361 RTLHPDDAEH AIDYCLSESQ AGRDHSFDYR MLAADGRVVW IRDLVTLIGQ GHELLLRGLM 420
  421 IDITETKHTE QALRLSEQKF ASVFHHCPDM VVLANGADGR FLAVNSTFEQ QIGIAATEAL 480
  481 GKTATELGIW GAPGLGPQVL EKLAQGNLAN LEVPLRRRDG DTFSALLSAQ HVTLDQRPAL 540
  541 VVVIRDITRL LETQELLRIS EEKFANAFHA SPDGLLISRL EDGTLIDVNE GFSRLTGYRR 600
  601 DEVTSRSTLE LGLWVDPEDR KRLMSLVRHH TLTQGFTAPV LIRNGSIRQC EMSAHQISIG 660
  661 GEDCVLTIAR DVTERQLMEE KLQQAATVFE STAEGVMITD TRQRITAVNR AFSEITGYSE 720
  721 QEALGQSPRL LSSGQHDRAF YLAMWNQLER EGHWQGEIWN RRKTGELYPE WLTISAVHNP 780
  781 QGEITHFVGV FADISTLKYA QARLDYQAHH DPLTGLPNRL LFEHRLDHAL DEAREESRPG 840
  841 AVLFIDLDRF KHINDSLGHP TGDLLLKAIA ERLRDQLRDV DTVARLGGDE FIILLPGLHQ 900
  901 ESDAEHVARK LLNAFTAPFQ ADGHEFFVSA SIGIALFPKD GDDAPTLVKN ADAAMYRAKS 960
  961 RGRSRIEYYT RELTFLATER MALETELRRA LERDELLLYY QPKLSLESGL LVGAEALVRW1020
 1021 HHPLFGEISP ERFIPLAEDC GLILPLGDWV LEHACQQMGD WQKLHAPFGP LSVNLAGAQL1080
 1081 GQPQLIERLR QLLAQSGLEP SRLQLEITES FIMNQTEEAL GVLRGLKDLG VQLAIDDFGT1140
 1141 GYSSLSYLKR LPLDILKIDK SFIRGLPDDP HDAAITRAII ALGRSMQLTV IAEGVETEGQ1200
 1201 QSFLTHEGCE QIQGFVLSPP LPAELFASKF LKPRQPIGAP REAPV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle