YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|94412457, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKALIAWLAG YWRVLRRPSV HFSLGFLTLG GFIAGIIFWG GFNTALEATN TETFCISCHE  60
   61 MRDNVFAELK DTIHYSNRSG VRATCPDCHV PHKWTDKIAR KMQASKEVWG KIFGTINTRE 120
  121 KFLDHRRELA EHEWARLKAN DSLECRNCHN FEFMDFTRQS VRARQMHSTA LASGEATCID 180
  181 CHKGIAHHLP DMTGVKGW

Type	Start	End	Confidence
Cytoplasmic	1	19	0.95
Transmembrane Helix	20	42	0.94
Non-Cytoplasmic	43	198	0.97